Exploring Microscopic Structures Using Holographic Video
By LabMedica International staff writers Posted on 04 Aug 2009 |

Image: Colored transmission electron micrograph (TEM) of lipid droplets in a developing fat cell (Photo courtesy of Steve Gschmeissner / SPL).
Physicists have developed a technique to record three-dimensional (3D) movies of microscopic systems, such as biologic molecules, through holographic video. The study has potential to improve medical diagnostics and drug discovery.
The technique, developed in the laboratory of New York University (NYU; NY, USA) physics professor David Grier, comprises two components: making and recording the images of microscopic systems and then analyzing these images. To generate and record images, the researchers created a holographic microscope, which is based on a traditional light microscope. However, instead of relying on an incandescent illuminator, which conventional microscopes employ, the holographic microscope uses a collimated laser beam that consists of a series of parallel rays of light and similar to a laser pointer.
When an object is placed into path of the microscope's beam, the object scatters some of the beam's light into a complex diffraction pattern. The scattered light overlaps with the original beam to create an interference pattern reminiscent of overlapping ripples in a pool of water. The microscope then magnifies the resulting pattern of light and dark and records it with a conventional digital video recorder (DVR). Each snapshot in the resulting video stream is a hologram of the original object. Unlike a conventional photograph, each holographic snapshot stores data about the three-dimensional structure and composition of the object that created the scattered light field.
The recorded holograms appear as a pattern of concentric light and dark rings. This resulting pattern contains a wealth of information about the material that originally scattered the light--where it was and its composition. Analyzing the images provided a different set of challenges. To do so, the researchers based their research on a quantitative theory explaining the pattern of light that objects scatter. The hypothesis, the Lorenz-Mie theory, maintains that the way light is scattered can reveal the size and composition of the object that is scattering it.
"We use that theory to analyze the hologram of each object in the snapshots of our video recording,” explained Prof. Grier, who is part of NYU's Center for Soft Matter Research. "Fitting the theory to the hologram of a sphere reveals the three-dimensional position of the sphere's center with remarkable resolution. It allows us to view particles a micrometer in size and with nanometric precision--that is, it captures their traits to within one billionth of a meter. That's a tremendous amount of information to obtain about a micrometer-scale object, particularly when you consider that you get all of that information in each snapshot. It exceeds other existing technology in terms of tracking particles and characterizing their make-up--and the holographic microscope can do both simultaneously.”
Because the analysis is computationally intensive, the researchers employ the number-crunching power of the graphic processing unit (GPU) used in high-end computer video cards. Originally developed to provide high-resolution video performance for computer games, these cards possess capabilities suitable for the holographic microscope.
The investigators have already employed the technique for a range of applications, from research in basic statistical physics to analyzing the composition of fat droplets in milk. More broadly, the technique creates a fundamental level; research in these areas seeks to understand whether or not certain molecular components, i.e., the building blocks of pharmaceuticals, stick together.
One approach, called a bead-based assay, creates micrometer-scale beads whose surfaces have active groups that bind to the target molecule. Because of their small size, the challenge for researchers is to determine if these beads actually adhere to the target molecules. The way this is traditionally done is to create yet another molecule--or tag--that binds to the target molecule. This tag molecule, time-consuming, and costly to produce, is typically identified by making it fluorescent or radioactive.
The holographic imaging technique, with its magnification and recording capabilities, allows researchers to observe molecular-scale binding without a tag, saving both time and money. Requiring just one microscopic bead to detect one type of molecule, holographic video microscopy promises a previously unachievable level of miniaturization for medical diagnostic tests and creates possibilities for running very large numbers of sensitive medical tests in parallel.
The study was reported in the July 7, 2009, issue of the journal Optics Express.
Related Links:
New York University
The technique, developed in the laboratory of New York University (NYU; NY, USA) physics professor David Grier, comprises two components: making and recording the images of microscopic systems and then analyzing these images. To generate and record images, the researchers created a holographic microscope, which is based on a traditional light microscope. However, instead of relying on an incandescent illuminator, which conventional microscopes employ, the holographic microscope uses a collimated laser beam that consists of a series of parallel rays of light and similar to a laser pointer.
When an object is placed into path of the microscope's beam, the object scatters some of the beam's light into a complex diffraction pattern. The scattered light overlaps with the original beam to create an interference pattern reminiscent of overlapping ripples in a pool of water. The microscope then magnifies the resulting pattern of light and dark and records it with a conventional digital video recorder (DVR). Each snapshot in the resulting video stream is a hologram of the original object. Unlike a conventional photograph, each holographic snapshot stores data about the three-dimensional structure and composition of the object that created the scattered light field.
The recorded holograms appear as a pattern of concentric light and dark rings. This resulting pattern contains a wealth of information about the material that originally scattered the light--where it was and its composition. Analyzing the images provided a different set of challenges. To do so, the researchers based their research on a quantitative theory explaining the pattern of light that objects scatter. The hypothesis, the Lorenz-Mie theory, maintains that the way light is scattered can reveal the size and composition of the object that is scattering it.
"We use that theory to analyze the hologram of each object in the snapshots of our video recording,” explained Prof. Grier, who is part of NYU's Center for Soft Matter Research. "Fitting the theory to the hologram of a sphere reveals the three-dimensional position of the sphere's center with remarkable resolution. It allows us to view particles a micrometer in size and with nanometric precision--that is, it captures their traits to within one billionth of a meter. That's a tremendous amount of information to obtain about a micrometer-scale object, particularly when you consider that you get all of that information in each snapshot. It exceeds other existing technology in terms of tracking particles and characterizing their make-up--and the holographic microscope can do both simultaneously.”
Because the analysis is computationally intensive, the researchers employ the number-crunching power of the graphic processing unit (GPU) used in high-end computer video cards. Originally developed to provide high-resolution video performance for computer games, these cards possess capabilities suitable for the holographic microscope.
The investigators have already employed the technique for a range of applications, from research in basic statistical physics to analyzing the composition of fat droplets in milk. More broadly, the technique creates a fundamental level; research in these areas seeks to understand whether or not certain molecular components, i.e., the building blocks of pharmaceuticals, stick together.
One approach, called a bead-based assay, creates micrometer-scale beads whose surfaces have active groups that bind to the target molecule. Because of their small size, the challenge for researchers is to determine if these beads actually adhere to the target molecules. The way this is traditionally done is to create yet another molecule--or tag--that binds to the target molecule. This tag molecule, time-consuming, and costly to produce, is typically identified by making it fluorescent or radioactive.
The holographic imaging technique, with its magnification and recording capabilities, allows researchers to observe molecular-scale binding without a tag, saving both time and money. Requiring just one microscopic bead to detect one type of molecule, holographic video microscopy promises a previously unachievable level of miniaturization for medical diagnostic tests and creates possibilities for running very large numbers of sensitive medical tests in parallel.
The study was reported in the July 7, 2009, issue of the journal Optics Express.
Related Links:
New York University
Latest BioResearch News
- Genome Analysis Predicts Likelihood of Neurodisability in Oxygen-Deprived Newborns
- Gene Panel Predicts Disease Progession for Patients with B-cell Lymphoma
- New Method Simplifies Preparation of Tumor Genomic DNA Libraries
- New Tool Developed for Diagnosis of Chronic HBV Infection
- Panel of Genetic Loci Accurately Predicts Risk of Developing Gout
- Disrupted TGFB Signaling Linked to Increased Cancer-Related Bacteria
- Gene Fusion Protein Proposed as Prostate Cancer Biomarker
- NIV Test to Diagnose and Monitor Vascular Complications in Diabetes
- Semen Exosome MicroRNA Proves Biomarker for Prostate Cancer
- Genetic Loci Link Plasma Lipid Levels to CVD Risk
- Newly Identified Gene Network Aids in Early Diagnosis of Autism Spectrum Disorder
- Link Confirmed between Living in Poverty and Developing Diseases
- Genomic Study Identifies Kidney Disease Loci in Type I Diabetes Patients
- Liquid Biopsy More Effective for Analyzing Tumor Drug Resistance Mutations
- New Liquid Biopsy Assay Reveals Host-Pathogen Interactions
- Method Developed for Enriching Trophoblast Population in Samples
Channels
Clinical Chemistry
view channel
Carbon Nanotubes Help Build Highly Accurate Sensors for Continuous Health Monitoring
Current sensors can measure various health indicators, such as blood glucose levels, in the body. However, there is a need to develop more accurate and sensitive sensor materials that can detect lower... Read more
Paper-Based Device Boosts HIV Test Accuracy from Dried Blood Samples
In regions where access to clinics for routine blood tests presents financial and logistical obstacles, HIV patients are increasingly able to collect and send a drop of blood using paper-based devices... Read moreMolecular Diagnostics
view channel
D-Dimer Testing Can Identify Patients at Higher Risk of Pulmonary Embolism
Pulmonary embolism (PE) is a commonly suspected condition in emergency departments (EDs) and can be life-threatening if not diagnosed correctly. Achieving an accurate diagnosis is vital for providing effective... Read more
New Biomarkers to Improve Early Detection and Monitoring of Kidney Injury
Drug-induced kidney injury, also known as nephrotoxicity, is a prevalent issue in clinical practice, occurring when specific medications at certain doses cause damage to the kidneys. Nephrotoxicity can... Read moreHematology
view channel
New Scoring System Predicts Risk of Developing Cancer from Common Blood Disorder
Clonal cytopenia of undetermined significance (CCUS) is a blood disorder commonly found in older adults, characterized by mutations in blood cells and a low blood count, but without any obvious cause or... Read more
Non-Invasive Prenatal Test for Fetal RhD Status Demonstrates 100% Accuracy
In the United States, approximately 15% of pregnant individuals are RhD-negative. However, in about 40% of these cases, the fetus is also RhD-negative, making the administration of RhoGAM unnecessary.... Read moreImmunology
view channel
Post-Treatment Blood Test Could Inform Future Cancer Therapy Decisions
In the ongoing advancement of personalized medicine, a new study has provided evidence supporting the use of a tool that detects cancer-derived molecules in the blood of lung cancer patients years after... Read moreCerebrospinal Fluid Test Predicts Dangerous Side Effect of Cancer Treatment
In recent years, cancer immunotherapy has emerged as a promising approach where the patient's immune system is harnessed to fight cancer. One form of immunotherapy, called CAR-T-cell therapy, involves... Read more
New Test Measures Preterm Infant Immunity Using Only Two Drops of Blood
Preterm infants are particularly vulnerable due to their organs still undergoing development, which can lead to difficulties in breathing, eating, and regulating body temperature. This is especially true... Read more
Simple Blood Test Could Help Choose Better Treatments for Patients with Recurrent Endometrial Cancer
Endometrial cancer, which develops in the lining of the uterus, is the most prevalent gynecologic cancer in the United States, affecting over 66,000 women annually. Projections indicate that in 2025, around... Read moreMicrobiology
view channel
Breakthrough Diagnostic Technology Identifies Bacterial Infections with Almost 100% Accuracy within Three Hours
Rapid and precise identification of pathogenic microbes in patient samples is essential for the effective treatment of acute infectious diseases, such as sepsis. The fluorescence in situ hybridization... Read moreInnovative ID/AST System to Help Diagnose Infectious Diseases and Combat AMR
Each year, 11 million people across the world die of sepsis out of which 1.3 million deaths are due to antibiotic-resistant bacteria. The burden of antimicrobial resistance (AMR) continues to weigh heavily,... Read more
Gastrointestinal Panel Delivers Rapid Detection of Five Common Bacterial Pathogens for Outpatient Use
Acute infectious gastroenteritis results in approximately 179 million cases each year in the United States, leading to a significant number of outpatient visits and hospitalizations. To address this, a... Read morePathology
view channel
AI Model Predicts Patient Response to Bladder Cancer Treatment
Each year in the United States, around 81,000 new cases of bladder cancer are diagnosed, leading to approximately 17,000 deaths annually. Muscle-invasive bladder cancer (MIBC) is a severe form of bladder... Read more
New Laser-Based Method to Accelerate Cancer Diagnosis
Researchers have developed a method to improve cancer diagnostics and other diseases. Collagen, a key structural protein, plays various roles in cell activity. A novel multidisciplinary study published... Read more
New AI Model Predicts Gene Variants’ Effects on Specific Diseases
In recent years, artificial intelligence (AI) has greatly enhanced our ability to identify a vast number of genetic variants in increasingly larger populations. However, up to half of these variants are... Read more
Powerful AI Tool Diagnoses Coeliac Disease from Biopsy Images with Over 97% Accuracy
Coeliac disease is an autoimmune disorder triggered by the consumption of gluten, causing symptoms such as stomach cramps, diarrhea, skin rashes, weight loss, fatigue, and anemia. Due to the wide variation... Read moreTechnology
view channel
Smartphones Could Diagnose Diseases Using Infrared Scans
Rapid advancements in technology may soon make it possible for individuals to bypass invasive medical procedures by simply uploading a screenshot of their lab results from their phone directly to their doctor.... Read more
Novel Sensor Technology to Enable Early Diagnoses of Metabolic and Cardiovascular Disorders
Metabolites are critical compounds that fuel life's essential functions, playing a key role in producing energy, regulating cellular activities, and maintaining the balance of bodily systems.... Read more
3D Printing Breakthrough Enables Large Scale Development of Tiny Microfluidic Devices
Microfluidic devices are diagnostic systems capable of analyzing small volumes of materials with precision and speed. These devices are used in a variety of applications, including cancer cell analysis,... Read moreIndustry
view channel
Tecan Acquires ELISA Immunoassay Assets from Revvity's Cisbio Bioassays
Tecan Group (Männedorf, Switzerland) has entered into an agreement to acquire certain assets relating to key ELISA immunoassay products from Cisbio Bioassays SAS (Codolet, France), a subsidiary of the... Read more