Clonal Hematopoiesis of Indeterminate Potential Associated with hsC-Reactive Protein
By LabMedica International staff writers Posted on 14 Jul 2020 |

Image: The Dimension Vista 500 Intelligent Laboratory System (Photo courtesy of Siemens Healthineers).
Clonal hematopoiesis (CH) occurring in normally aging subjects, initially suggested by X-chromosome inactivation studies, is caused by acquired mutations in genes recurrently mutated in hematological cancers, and in non-driver candidates.
Clonal hematopoiesis of indeterminate potential (CHIP) is predictive of hematological cancers and cardiovascular diseases, but the etiology of CHIP initiation and clonal expansion is unknown. Several lines of evidence suggest that proinflammatory cytokines may favor mutated hematopoietic stem cell expansion.
A team of scientists at the Université de Montréal (Montreal, QC, Canada) and their associates investigated the potential link between inflammation and CHIP, and performed targeted deep sequencing of 11 genes previously implicated in CHIP in 1,887 subjects aged >70 years from the Montreal Heart Institute Biobank, of which 1,359 had prior coronary artery disease (CAD), and 528 controls did not.
The study subject’s DNA was sequenced at high coverage (95% >500×) on an Ion Proton sequencer using a custom Ampliseq “CHIP” panel (Thermo Fisher Scientific, Waltham, MA, USA) designed to target the top 11 genes reported in CHIP (ASXL1, CBL, DNMT3A, GNAS, GNB1, JAK2 [chr9:5073674- 5073808], PPM1D, SF3B1 [exons 14 to 16], SRSF2, TET2, and TP53) with 202 amplicons covering 38.49 kb. Highly Sensitive-C-reactive protein (hs-CRP) concentration was measured by quantitative immunonephelometric analysis on a Dimension Vista 500 Intelligent Laboratory System (Siemens Healthineers, Erlangen, Germany) and hs-CRP is a validated biomarker of inflammation.
The scientists identified CHIP in 427 of the 1,887 subjects (22.6%). CHIP mutations were more frequently identified in DNMT3A (11.6%) and TET2 (6.1%), with a higher proportion of TET2 mutations occurring in controls than in patients with CAD (9.0% versus 4.9%). Mutations in DNMT3A, TET2, and ASXL1 accounted for the majority of mutations (82.9%). CHIP carriers had 21% higher hs-CRP levels compared with their non-carrier counterparts (median: 1.60 mg/L versus 1.41 mg/L) and a similar effect was observed in the subgroup of patients with known CAD.
The authors concluded that their study highlights the role of inflammation in CHIP. The etiology of CHIP is probably multifactorial, and several other factors need to be identified. Clinical trials should test whether anti-inflammatory therapy can reduce CHIP progression and related diseases. The study was published on June 3, 2020 in the journal Blood Advances.
Clonal hematopoiesis of indeterminate potential (CHIP) is predictive of hematological cancers and cardiovascular diseases, but the etiology of CHIP initiation and clonal expansion is unknown. Several lines of evidence suggest that proinflammatory cytokines may favor mutated hematopoietic stem cell expansion.
A team of scientists at the Université de Montréal (Montreal, QC, Canada) and their associates investigated the potential link between inflammation and CHIP, and performed targeted deep sequencing of 11 genes previously implicated in CHIP in 1,887 subjects aged >70 years from the Montreal Heart Institute Biobank, of which 1,359 had prior coronary artery disease (CAD), and 528 controls did not.
The study subject’s DNA was sequenced at high coverage (95% >500×) on an Ion Proton sequencer using a custom Ampliseq “CHIP” panel (Thermo Fisher Scientific, Waltham, MA, USA) designed to target the top 11 genes reported in CHIP (ASXL1, CBL, DNMT3A, GNAS, GNB1, JAK2 [chr9:5073674- 5073808], PPM1D, SF3B1 [exons 14 to 16], SRSF2, TET2, and TP53) with 202 amplicons covering 38.49 kb. Highly Sensitive-C-reactive protein (hs-CRP) concentration was measured by quantitative immunonephelometric analysis on a Dimension Vista 500 Intelligent Laboratory System (Siemens Healthineers, Erlangen, Germany) and hs-CRP is a validated biomarker of inflammation.
The scientists identified CHIP in 427 of the 1,887 subjects (22.6%). CHIP mutations were more frequently identified in DNMT3A (11.6%) and TET2 (6.1%), with a higher proportion of TET2 mutations occurring in controls than in patients with CAD (9.0% versus 4.9%). Mutations in DNMT3A, TET2, and ASXL1 accounted for the majority of mutations (82.9%). CHIP carriers had 21% higher hs-CRP levels compared with their non-carrier counterparts (median: 1.60 mg/L versus 1.41 mg/L) and a similar effect was observed in the subgroup of patients with known CAD.
The authors concluded that their study highlights the role of inflammation in CHIP. The etiology of CHIP is probably multifactorial, and several other factors need to be identified. Clinical trials should test whether anti-inflammatory therapy can reduce CHIP progression and related diseases. The study was published on June 3, 2020 in the journal Blood Advances.
Latest Molecular Diagnostics News
- Newly-Cleared Technology a Game Changer for Diagnosis of Lyme Disease
- Innovative Liquid Biopsy Test Uses RNA to Detect Early-Stage Cancer
- Rapid Tests for Chagas Disease Improves Diagnostic Access
- Simple Blood Test to Predict Alzheimer’s Clinical Progression in Earliest Stages
- Saliva Test Could Identify People Genetically Susceptible to Type 2 Diabetes
- Pioneering Analyzer with Advanced Biochip Technology Sets New Standard in Lab Diagnostics
- RNA-Seq Based Diagnostic Test Enhances Diagnostic Accuracy of Pediatric Leukemia
- New Technique for Measuring Acidic Glycan in Blood Simplifies Schizophrenia Diagnosis
- Injury Molecular Fingerprint Enables Real-Time Diagnostics for On-Site Treatment
- Blood Test Could Predict Likelihood of Breast Cancer Spreading to The Bone
- New Infectious Disease Analytics Platform Speeds Up Clinical Decision-Making at POC
- Genetic Test Could Predict Poor Outcomes in Lung Transplant Patients
- Breakthrough Blood Test Enables Early Pancreatic Cancer Detection
- Genomic Testing in NICU Reduces Missed Diagnoses
- New Genetic Test Improves Diabetes Prediction and Classification
- New Blood Test for Leukemia Risk Detection Could Replace Bone Marrow Sampling
Channels
Clinical Chemistry
view channel
New Clinical Chemistry Analyzer Designed to Meet Growing Demands of Modern Labs
A new clinical chemistry analyzer is designed to provide outstanding performance and maximum efficiency, without compromising affordability, to meet the growing demands of modern laboratories.... Read more
New Reference Measurement Procedure Standardizes Nucleic Acid Amplification Test Results
Nucleic acid amplification tests (NAATs) play a key role in diagnosing a wide range of infectious diseases. These tests are generally known for their high sensitivity and specificity, and they can be developed... Read moreHematology
view channel
Disposable Cartridge-Based Test Delivers Rapid and Accurate CBC Results
Complete Blood Count (CBC) is one of the most commonly ordered lab tests, crucial for diagnosing diseases, monitoring therapies, and conducting routine health screenings. However, more than 90% of physician... Read more
First Point-of-Care Heparin Monitoring Test Provides Results in Under 15 Minutes
Heparin dosing requires careful management to avoid both bleeding and clotting complications. In high-risk situations like extracorporeal membrane oxygenation (ECMO), mortality rates can reach about 50%,... Read moreImmunology
view channel
World’s First Clinical Test Predicts Best Rheumatoid Arthritis Treatment
Rheumatoid arthritis (RA) is a chronic condition affecting 1 in 100 people in the UK today, causing the immune system to attack its joints. Unlike osteoarthritis, which is caused by wear and tear, RA can... Read more
Blood Test Detects Organ Rejection in Heart Transplant Patients
Following a heart transplant, patients are required to undergo surgical biopsies so that physicians can assess the possibility of organ rejection. Rejection happens when the recipient’s immune system identifies... Read more
Liquid Biopsy Approach to Transform Diagnosis, Monitoring and Treatment of Lung Cancer
Lung cancer continues to be a major contributor to cancer-related deaths globally, with its biological complexity and diverse regulatory processes making diagnosis and treatment particularly difficult.... Read more
Computational Tool Exposes Hidden Cancer DNA Changes Influencing Treatment Resistance
Structural changes in tumor DNA are among the most damaging genetic alterations in cancer, yet they often go undetected, particularly when tissue samples are degraded or of low quality. These hidden genomic... Read moreMicrobiology
view channel
Viral Load Tests Can Help Predict Mpox Severity
Mpox is a viral infection that causes flu-like symptoms and a characteristic rash, which evolves significantly over time and varies between patients. The disease spreads mainly through direct contact with... Read more
Gut Microbiota Analysis Enables Early and Non-Invasive Detection of Gestational Diabetes
Gestational diabetes mellitus is a common metabolic disorder marked by abnormal glucose metabolism during pregnancy, typically emerging in the mid to late stages. It significantly heightens the risk of... Read morePathology
view channel
AI Tool Enhances Interpretation of Tissue Samples by Pathologists
Malignant melanoma, a form of skin cancer, is diagnosed by pathologists based on tissue samples. A crucial aspect of this process is estimating the presence of tumor-infiltrating lymphocytes (TILs), immune... Read more
AI-Assisted Technique Tracks Cells Damaged from Injury, Aging and Disease
Senescent cells, which stop growing and reproducing due to injury, aging, or disease, play a critical role in wound repair and aging-related diseases like cancer and heart disease. These cells, however,... Read more
Novel Fluorescent Probe Shows Potential in Precision Cancer Diagnostics and Fluorescence-Guided Surgery
Hepatocellular carcinoma (HCC), a common type of liver cancer, is difficult to diagnose early and accurately due to the limitations of current diagnostic methods. Glycans, carbohydrate structures present... Read moreTechnology
view channel
Low-Cost Biosensing Technology Detects Disease Biomarkers in Minutes
Rapid at-home tests for diseases like COVID-19 have become increasingly popular for their convenience, but they come with a major drawback: they are less sensitive than the tests performed in medical settings.... Read more
AI Tool Could Help Identify Specific Gut Bacterial Targets for Treatment of Diseases
The human body hosts trillions of bacteria, particularly in the gut, which have a significant role in digestion and various other aspects of health. These gut bacteria produce a variety of metabolites... Read moreIndustry
view channel
Quanterix Completes Acquisition of Akoya Biosciences
Quanterix Corporation (Billerica, MA, USA) has completed its previously announced acquisition of Akoya Biosciences (Marlborough, MA, USA), paving the way for the creation of the first integrated solution... Read more
Lunit and Microsoft Collaborate to Advance AI-Driven Cancer Diagnosis
Lunit (Seoul, South Korea) and Microsoft (Redmond, WA, USA) have entered into a collaboration to accelerate the delivery of artificial intelligence (AI)-powered healthcare solutions. In conjunction with... Read more