Prognostic Biomarker Found for Colon Cancer Patients
|
By LabMedica International staff writers Posted on 10 Feb 2016 |

Image: Patients whose stage II colon cancer tested negative for CDX2 expression (left) had a worse prognosis than those whose cancer tested positive (right) (Photo courtesy of Columbia University Medical Center).
The majority of colon cancer patients whose tumors have started to travel to nearby tissue but no further are cured by surgery alone, but in a minority of these stage II colon cancer cases the cancer returns and the patients die.
The identification of high-risk stage II colon cancers is key to the selection of patients who require adjuvant treatment after surgery and microarray-based multigene-expression signatures derived from stem cells and progenitor cells hold promise, but they are difficult to use in clinical practice.
Scientists at the Columbia University Medical Center (New York, NY, USA) and their colleagues obtained colon-cancer tissue microarrays, fully annotated with clinical and pathological information, from three independent sources: 367 patients in the Cancer Diagnosis Program of the National Cancer Institute, 1,519 patients in the National Surgical Adjuvant Breast and Bowel Project C-07 trial, and 321 patients in the Stanford Tissue Microarray Database.
Formalin-fixed, paraffin-embedded tissue sections were stained with a mouse antihuman caudal-type homeobox transcription factor 2 (CDX2) monoclonal antibody that was previously validated for diagnostic applications (clone CDX2-88, BioGenex; Fremont, CA, USA). Tissue slides were stained on a Bond-Max automatic stainer and antigen detection was visualized with the use of the Bond Polymer Refine Detection kit (Leica Microsystems; Buffalo Grove, IL, USA). All tissue microarrays were scored for CDX2 expression in a blinded fashion and in cases in which tissue microarrays contained two tissue cores for a patient the two cores were scored independently and paired at the end.
Using a new bioinformatics approach, the team searched data from over 2,000 colon cancer patients and found 16 genes whose lack of expression is always tied to high levels of cancer stem cell markers. Of the 16 potential biomarkers, they found only one, the gene CDX2, for which a standardized test that detects its expression is already available. CDX2 regulates cell differentiation that is deciding the type of cell an immature stem cell matures into in the lining of the colon, which is where colon cancer starts. The team found that colon cancer patients whose tumors did not express CDX2 were more likely to relapse and die compared with patients whose tumors did express CDX2.
Piero Dalerba, MD, an assistant professor of medicine, pathology and cell biology, and lead author said, “We wanted to understand if the small group lacking CDX2 expression—approximately 4% of the global colon cancer population—fared poorly because of an intrinsic resistance to chemotherapy. To our surprise, we found that, on the contrary, tumors lacking CDX2 expression, despite being very aggressive from a biological point of view, also appeared to benefit from early treatment with adjuvant chemotherapy.” The study was published on January 21, 2016, in the New England Journal of Medicine (NEJM).
Related Links:
Columbia University Medical Center
BioGenex
Leica Microsystems
The identification of high-risk stage II colon cancers is key to the selection of patients who require adjuvant treatment after surgery and microarray-based multigene-expression signatures derived from stem cells and progenitor cells hold promise, but they are difficult to use in clinical practice.
Scientists at the Columbia University Medical Center (New York, NY, USA) and their colleagues obtained colon-cancer tissue microarrays, fully annotated with clinical and pathological information, from three independent sources: 367 patients in the Cancer Diagnosis Program of the National Cancer Institute, 1,519 patients in the National Surgical Adjuvant Breast and Bowel Project C-07 trial, and 321 patients in the Stanford Tissue Microarray Database.
Formalin-fixed, paraffin-embedded tissue sections were stained with a mouse antihuman caudal-type homeobox transcription factor 2 (CDX2) monoclonal antibody that was previously validated for diagnostic applications (clone CDX2-88, BioGenex; Fremont, CA, USA). Tissue slides were stained on a Bond-Max automatic stainer and antigen detection was visualized with the use of the Bond Polymer Refine Detection kit (Leica Microsystems; Buffalo Grove, IL, USA). All tissue microarrays were scored for CDX2 expression in a blinded fashion and in cases in which tissue microarrays contained two tissue cores for a patient the two cores were scored independently and paired at the end.
Using a new bioinformatics approach, the team searched data from over 2,000 colon cancer patients and found 16 genes whose lack of expression is always tied to high levels of cancer stem cell markers. Of the 16 potential biomarkers, they found only one, the gene CDX2, for which a standardized test that detects its expression is already available. CDX2 regulates cell differentiation that is deciding the type of cell an immature stem cell matures into in the lining of the colon, which is where colon cancer starts. The team found that colon cancer patients whose tumors did not express CDX2 were more likely to relapse and die compared with patients whose tumors did express CDX2.
Piero Dalerba, MD, an assistant professor of medicine, pathology and cell biology, and lead author said, “We wanted to understand if the small group lacking CDX2 expression—approximately 4% of the global colon cancer population—fared poorly because of an intrinsic resistance to chemotherapy. To our surprise, we found that, on the contrary, tumors lacking CDX2 expression, despite being very aggressive from a biological point of view, also appeared to benefit from early treatment with adjuvant chemotherapy.” The study was published on January 21, 2016, in the New England Journal of Medicine (NEJM).
Related Links:
Columbia University Medical Center
BioGenex
Leica Microsystems
Latest Molecular Diagnostics News
- Liquid Biopsy Measures Tumor Burden and Identifies Small Cell Lung Cancer Subtypes
- Tumor and Immune Biomarkers Linked to Treatment Response in T-Cell Lymphoma
- Rapid Lab-Free UTI Test Enters First Use in Care Home Setting
- Blood MRD Testing Aids Risk Analysis in Bladder and Other Cancers
- New NGS Panel Detects AML Fusions at MRD-Level Sensitivity
- Spinal Fluid Liquid Biopsy May Help Clarify Uncertain Brain Tumor Findings
- Blood-Based Small RNA Assay Predicts Survival After Lung Cancer Treatment
- RNA Sequencing Assay Gains EU Certification for Solid Tumor Profiling
- Whole-Genome MRD Test Detects Traces of Cancer During and After Treatment
- Genomic Tissue Test Predicts Metastasis and Abiraterone Benefit in High-Risk Prostate Cancer
- Updated Framework Guides Assessment of Actionable Cancer Biomarkers
- Six-Gene Score Improves Prognosis Prediction in Acute Myeloid Leukemia
- Long-Read Sequencing Reveals Cancer-Driving Changes Missed by Conventional Testing
- Molecular Vaginitis Panel Gains FDA Clearance and CLIA Waiver for Point-of-Care Use
- Donor-Derived DNA Testing May Reduce Biopsies in Kidney Transplant Monitoring
- AI Tool Predicts Immunotherapy Response Using Tumor Senescence Signals
Channels
Clinical Chemistry
view channel
Blood Proteins Linked to Mortality Risk and Biological Aging Across Organ Systems
Older adults of the same chronological age can differ markedly in health, chronic disease burden, and resilience. Biological age aims to capture these differences by reflecting how rapidly the body and... Read more
Two-Step Blood Test Improves Specificity for Alzheimer’s Diagnosis
Early Alzheimer’s disease can be difficult to identify before more severe cognitive symptoms emerge. Blood tests measuring phosphorylated tau protein p-tau217 may help detect disease-related changes, but... Read moreMolecular Diagnostics
view channel
Tumor and Immune Biomarkers Linked to Treatment Response in T-Cell Lymphoma
T-follicular helper cell lymphoma (TFHL) is a subtype of peripheral T-cell lymphoma associated with poor prognosis and limited treatment options after relapse. Its molecular abnormalities include frequent... Read more
Blood MRD Testing Aids Risk Analysis in Bladder and Other Cancers
Natera (Austin, TX, USA) presented findings from 25 abstracts, including nine oral presentations, at the ESMO Congress 2026 in Madrid. The research examined circulating tumor DNA (ctDNA) testing for molecular... Read moreHematology
view channel
Genetic Testing Offers Opportunities for Earlier Blood Disorder Carrier Identification
Inherited hemoglobin disorders can affect oxygen transport, yet individuals who carry only a trait may remain unaware of their status. People with sickle cell trait or beta-thalassemia trait often have... Read more
New Risk-Stratification Tool Predicts Relapse After Blinatumomab in Childhood ALL
Acute lymphoblastic leukemia in children and young people requires careful assessment of relapse risk, particularly as treatment approaches move beyond standard chemotherapy. Traditional relapse predictors... Read moreImmunology
view channel
Prototype Point-of-Care Lateral Flow Test Aims to Improve Neonatal Sepsis Triage
Sepsis in newborns and young infants remains a major clinical challenge, particularly in low- and middle-income countries. An estimated 2.3 million newborns die each year, with sepsis contributing substantially... Read more
Immune and Inflammatory Markers May Help Assess CAR T-Cell Complication Risk
Cytokine release syndrome (CRS) can occur after chimeric antigen receptor (CAR) T-cell therapy in patients with autoimmune disease. Identifying which patients are more likely to develop this complication... Read moreMicrobiology
view channel
Decentralized Laboratory Network Improves Detection of Viral Hemorrhagic Fevers in Guinea
Viral hemorrhagic fevers remain a major diagnostic challenge in West Africa because their early symptoms can resemble those of other febrile illnesses. The 2014–2016 Ebola epidemic underscored the need... Read more
Molecular Panel Gains WHO Emergency Use Listing to Support Ebola Outbreak Response
The ongoing Ebola Bundibugyo outbreak in the Democratic Republic of the Congo and neighboring countries has become one of the largest outbreaks of this Ebola virus species recorded to date.... Read moreTechnology
view channel
Microfluidic Assay Predicts Treatment Response in Pediatric Leukemia
Acute lymphoblastic leukemia (ALL) is a rapidly developing blood cancer that can disrupt production of mature infection-fighting white blood cells within months. More than 120,000 people in the U.... Read more
AI Models Use Routine Blood Tests and Health Records to Predict Cancer Risk
Cancer screening programs cover only certain cancers and often rely on broad eligibility criteria, limiting individualized risk assessment across multiple cancer types. Routine health data, including blood... Read moreIndustry
view channel
CE-Marked IVD Sequencing Platform Launches Across Ten EU Countries
Clinical laboratories using sequencing in regulated diagnostic workflows need systems that support clearly defined processes and documentation. In Europe, meeting applicable EU IVDR requirements also means... Read more







.jpg)